LICENSE
README-package.md
README.md
pyproject.toml
api/__init__.py
api/batch_processing/__init__.py
api/batch_processing/api_core/__init__.py
api/batch_processing/api_core/server.py
api/batch_processing/api_core/server_api_config.py
api/batch_processing/api_core/server_app_config.py
api/batch_processing/api_core/server_batch_job_manager.py
api/batch_processing/api_core/server_job_status_table.py
api/batch_processing/api_core/server_orchestration.py
api/batch_processing/api_core/server_utils.py
api/batch_processing/api_core/batch_service/__init__.py
api/batch_processing/api_core/batch_service/score.py
api/batch_processing/api_core_support/__init__.py
api/batch_processing/api_core_support/aggregate_results_manually.py
api/batch_processing/api_support/__init__.py
api/batch_processing/api_support/summarize_daily_activity.py
api/batch_processing/data_preparation/__init__.py
api/batch_processing/data_preparation/manage_local_batch.py
api/batch_processing/data_preparation/manage_video_batch.py
api/batch_processing/integration/digiKam/setup.py
api/batch_processing/integration/digiKam/xmp_integration.py
api/batch_processing/integration/eMammal/test_scripts/config_template.py
api/batch_processing/integration/eMammal/test_scripts/push_annotations_to_emammal.py
api/batch_processing/integration/eMammal/test_scripts/select_images_for_testing.py
api/batch_processing/postprocessing/__init__.py
api/batch_processing/postprocessing/add_max_conf.py
api/batch_processing/postprocessing/categorize_detections_by_size.py
api/batch_processing/postprocessing/combine_api_outputs.py
api/batch_processing/postprocessing/compare_batch_results.py
api/batch_processing/postprocessing/convert_output_format.py
api/batch_processing/postprocessing/load_api_results.py
api/batch_processing/postprocessing/md_to_coco.py
api/batch_processing/postprocessing/md_to_labelme.py
api/batch_processing/postprocessing/merge_detections.py
api/batch_processing/postprocessing/postprocess_batch_results.py
api/batch_processing/postprocessing/remap_detection_categories.py
api/batch_processing/postprocessing/render_detection_confusion_matrix.py
api/batch_processing/postprocessing/separate_detections_into_folders.py
api/batch_processing/postprocessing/subset_json_detector_output.py
api/batch_processing/postprocessing/top_folders_to_bottom.py
api/batch_processing/postprocessing/repeat_detection_elimination/find_repeat_detections.py
api/batch_processing/postprocessing/repeat_detection_elimination/remove_repeat_detections.py
api/batch_processing/postprocessing/repeat_detection_elimination/repeat_detections_core.py
api/synchronous/__init__.py
api/synchronous/api_core/animal_detection_api/__init__.py
api/synchronous/api_core/animal_detection_api/api_backend.py
api/synchronous/api_core/animal_detection_api/api_frontend.py
api/synchronous/api_core/animal_detection_api/config.py
api/synchronous/api_core/animal_detection_api/data_management/annotations/annotation_constants.py
api/synchronous/api_core/animal_detection_api/detection/process_video.py
api/synchronous/api_core/animal_detection_api/detection/pytorch_detector.py
api/synchronous/api_core/animal_detection_api/detection/run_detector.py
api/synchronous/api_core/animal_detection_api/detection/run_detector_batch.py
api/synchronous/api_core/animal_detection_api/detection/run_inference_with_yolov5_val.py
api/synchronous/api_core/animal_detection_api/detection/run_tiled_inference.py
api/synchronous/api_core/animal_detection_api/detection/tf_detector.py
api/synchronous/api_core/animal_detection_api/detection/video_utils.py
api/synchronous/api_core/animal_detection_api/detection/detector_training/copy_checkpoints.py
api/synchronous/api_core/animal_detection_api/detection/detector_training/model_main_tf2.py
api/synchronous/api_core/animal_detection_api/md_utils/azure_utils.py
api/synchronous/api_core/animal_detection_api/md_utils/ct_utils.py
api/synchronous/api_core/animal_detection_api/md_utils/directory_listing.py
api/synchronous/api_core/animal_detection_api/md_utils/matlab_porting_tools.py
api/synchronous/api_core/animal_detection_api/md_utils/path_utils.py
api/synchronous/api_core/animal_detection_api/md_utils/process_utils.py
api/synchronous/api_core/animal_detection_api/md_utils/sas_blob_utils.py
api/synchronous/api_core/animal_detection_api/md_utils/string_utils.py
api/synchronous/api_core/animal_detection_api/md_utils/url_utils.py
api/synchronous/api_core/animal_detection_api/md_utils/write_html_image_list.py
api/synchronous/api_core/animal_detection_api/md_visualization/visualization_utils.py
api/synchronous/api_core/tests/__init__.py
api/synchronous/api_core/tests/load_test.py
classification/__init__.py
classification/aggregate_classifier_probs.py
classification/analyze_failed_images.py
classification/cache_batchapi_outputs.py
classification/create_classification_dataset.py
classification/crop_detections.py
classification/csv_to_json.py
classification/detect_and_crop.py
classification/evaluate_model.py
classification/identify_mislabeled_candidates.py
classification/json_to_azcopy_list.py
classification/json_validator.py
classification/map_classification_categories.py
classification/merge_classification_detection_output.py
classification/prepare_classification_script.py
classification/prepare_classification_script_mc.py
classification/run_classifier.py
classification/save_mislabeled.py
classification/train_classifier.py
classification/train_classifier_tf.py
classification/train_utils.py
classification/efficientnet/__init__.py
classification/efficientnet/model.py
classification/efficientnet/utils.py
data_management/__init__.py
data_management/camtrap_dp_to_coco.py
data_management/cct_json_utils.py
data_management/cct_to_md.py
data_management/cct_to_wi.py
data_management/coco_to_labelme.py
data_management/coco_to_yolo.py
data_management/generate_crops_from_cct.py
data_management/get_image_sizes.py
data_management/labelme_to_coco.py
data_management/labelme_to_yolo.py
data_management/ocr_tools.py
data_management/read_exif.py
data_management/remap_coco_categories.py
data_management/remove_exif.py
data_management/resize_coco_dataset.py
data_management/wi_download_csv_to_coco.py
data_management/yolo_output_to_md_output.py
data_management/yolo_to_coco.py
data_management/annotations/__init__.py
data_management/annotations/annotation_constants.py
data_management/databases/__init__.py
data_management/databases/add_width_and_height_to_db.py
data_management/databases/combine_coco_camera_traps_files.py
data_management/databases/integrity_check_json_db.py
data_management/databases/subset_json_db.py
data_management/importers/add_nacti_sizes.py
data_management/importers/add_timestamps_to_icct.py
data_management/importers/animl_results_to_md_results.py
data_management/importers/auckland_doc_test_to_json.py
data_management/importers/auckland_doc_to_json.py
data_management/importers/awc_to_json.py
data_management/importers/bellevue_to_json.py
data_management/importers/cacophony-thermal-importer.py
data_management/importers/carrizo_shrubfree_2018.py
data_management/importers/carrizo_trail_cam_2017.py
data_management/importers/cct_field_adjustments.py
data_management/importers/channel_islands_to_cct.py
data_management/importers/ena24_to_json.py
data_management/importers/filenames_to_json.py
data_management/importers/helena_to_cct.py
data_management/importers/idaho-camera-traps.py
data_management/importers/idfg_iwildcam_lila_prep.py
data_management/importers/jb_csv_to_json.py
data_management/importers/mcgill_to_json.py
data_management/importers/missouri_to_json.py
data_management/importers/nacti_fieldname_adjustments.py
data_management/importers/noaa_seals_2019.py
data_management/importers/pc_to_json.py
data_management/importers/plot_wni_giraffes.py
data_management/importers/prepare-noaa-fish-data-for-lila.py
data_management/importers/prepare_zsl_imerit.py
data_management/importers/rspb_to_json.py
data_management/importers/save_the_elephants_survey_A.py
data_management/importers/save_the_elephants_survey_B.py
data_management/importers/snapshot_safari_importer.py
data_management/importers/snapshot_safari_importer_reprise.py
data_management/importers/snapshot_serengeti_lila.py
data_management/importers/sulross_get_exif.py
data_management/importers/timelapse_csv_set_to_json.py
data_management/importers/ubc_to_json.py
data_management/importers/umn_to_json.py
data_management/importers/wellington_to_json.py
data_management/importers/wi_to_json.py
data_management/importers/zamba_results_to_md_results.py
data_management/importers/eMammal/copy_and_unzip_emammal.py
data_management/importers/eMammal/eMammal_helpers.py
data_management/importers/eMammal/make_eMammal_json.py
data_management/importers/snapshotserengeti/make_full_SS_json.py
data_management/importers/snapshotserengeti/make_per_season_SS_json.py
data_management/lila/__init__.py
data_management/lila/add_locations_to_island_camera_traps.py
data_management/lila/add_locations_to_nacti.py
data_management/lila/create_lila_blank_set.py
data_management/lila/create_lila_test_set.py
data_management/lila/create_links_to_md_results_files.py
data_management/lila/download_lila_subset.py
data_management/lila/generate_lila_per_image_labels.py
data_management/lila/get_lila_annotation_counts.py
data_management/lila/get_lila_image_counts.py
data_management/lila/lila_common.py
data_management/lila/test_lila_metadata_urls.py
detection/__init__.py
detection/process_video.py
detection/pytorch_detector.py
detection/run_detector.py
detection/run_detector_batch.py
detection/run_inference_with_yolov5_val.py
detection/run_tiled_inference.py
detection/tf_detector.py
detection/video_utils.py
detection/detector_training/__init__.py
detection/detector_training/model_main_tf2.py
docs/source/conf.py
md_utils/__init__.py
md_utils/azure_utils.py
md_utils/ct_utils.py
md_utils/directory_listing.py
md_utils/md_tests.py
md_utils/path_utils.py
md_utils/process_utils.py
md_utils/sas_blob_utils.py
md_utils/split_locations_into_train_val.py
md_utils/string_utils.py
md_utils/url_utils.py
md_utils/write_html_image_list.py
md_visualization/__init__.py
md_visualization/plot_utils.py
md_visualization/render_images_with_thumbnails.py
md_visualization/visualization_utils.py
md_visualization/visualize_db.py
md_visualization/visualize_detector_output.py
megadetector.egg-info/PKG-INFO
megadetector.egg-info/SOURCES.txt
megadetector.egg-info/dependency_links.txt
megadetector.egg-info/requires.txt
megadetector.egg-info/top_level.txt
taxonomy_mapping/__init__.py
taxonomy_mapping/map_lila_taxonomy_to_wi_taxonomy.py
taxonomy_mapping/map_new_lila_datasets.py
taxonomy_mapping/prepare_lila_taxonomy_release.py
taxonomy_mapping/preview_lila_taxonomy.py
taxonomy_mapping/retrieve_sample_image.py
taxonomy_mapping/simple_image_download.py
taxonomy_mapping/species_lookup.py
taxonomy_mapping/taxonomy_csv_checker.py
taxonomy_mapping/taxonomy_graph.py
taxonomy_mapping/validate_lila_category_mappings.py