Validation Report

Project Summary

General details about the project

Project Title: My cool project

Validation Date: 2023-08-31 12:34:56

Submission Directory: /test/submission/dir

Note for human genotype data:

You will need to provide a signed copy of our Consent Statement via email to eva-helpdesk@ebi.ac.uk after submission. Your submission will only be processed after receiving the consent statement. For more info, please see our help section.

▶ Files mapping

VCF File	Fasta File	Analysis
input_fail.vcf	input_fail.fa	A
input_pass.vcf	input_pass.fa	B
input_test.vcf	input_test.fa	could not be linked

Metadata validation results

Ensures that required fields are present and values are formatted correctly. For requirements, please refer to the EVA website.

⏸ Process not run yet

VCF validation results

Checks whether each file is compliant with the VCF specification. Also checks whether the variants' reference alleles match against the reference assembly.

⏸ Process not run yet

Sample name concordance check

Checks whether information in the metadata is concordant with that contained in the VCF files, in particular sample names.

⏸ Process not run yet

Reference genome INSDC check

Checks that the reference sequences in the FASTA file used to call the variants are accessioned in INSDC. Also checks if the reference assembly accession in the metadata matches the one determined from the FASTA file.

⏸ Process not run yet