# Python
__pycache__/
*.py[cod]
*$py.class
*.so
.Python
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib/
lib64/
parts/
sdist/
var/
wheels/
*.egg-info/
.installed.cfg
*.egg
MANIFEST

# Installer logs
pip-log.txt
pip-delete-this-directory.txt

# Unit test / coverage reports
htmlcov/
.tox/
.nox/
.coverage
.coverage.*
.cache
nosetests.xml
coverage.xml
*.cover
.hypothesis/
.pytest_cache/

# Jupyter Notebook
.ipynb_checkpoints

# Environments
.env
.venv
env/
venv/
ENV/
env.bak/
venv.bak/

# IDE
.vscode/
.idea/
*.code-workspace
*.sublime-project
*.sublime-workspace

# OS generated files
.DS_Store
.DS_Store?
._*
.Spotlight-V100
.Trashes
ehthumbs.db
Thumbs.db
*~
*.swp
*.swo

# Medical imaging specific files
*.nii.gz
*.nii
*.dcm
*.dicom
*.mha
*.mhd
*.nrrd
*.img
*.hdr
*.nii.gz.bak
*.nii.bak
*.dcm.bak
*.dicom.bak

# Model checkpoints and training outputs
outputs/
checkpoints/
logs/
wandb/
mlruns/
*.ckpt
*.pth
*.pt
*.h5
*.hdf5
*.onnx

# Tensorboard logs
runs/
tb_logs/

# Temporary inference results
temp_results/
predictions/
inference_output/

# Datasets
Dataset/
data/
LITS2017/
2025WAIC/
Coal_data/

# Slurm job files
*.out
*.err
slurm-*.out
